Annotation Overview for fig|243365.1.peg.3701 in Chromobacterium violaceum ATCC 12472:
Deoxyribose-phosphate aldolase (EC 4.1.2.4)
| current assignment | Deoxyribose-phosphate aldolase (EC 4.1.2.4) | EC Number | 4.1.2.4 | ||
|---|---|---|---|---|---|
| taxonomy id | 243365 | contig | |||
| internal links | genome browser | feature evidence | sequence | ACH [?] | show essentially identical genes | ||
| annotation history | run tool | ||||
| FigFam | FIG000450 | ||||
| data base cross references (dbxref) | |||||
This feature is part of a subsystem
Reasons for Current Assignment
We have assigned the function "Deoxyribose-phosphate aldolase (EC 4.1.2.4)" to the encoded protein.
The protein occurs in 1 subsystem: "Deoxyribose and Deoxynucleoside Catabolism". In "Deoxyribose
and Deoxynucleoside Catabolism", it appears to play a functional role that we have not associated
with any other gene, and it occurs in close proximity on the chromosome with 3 other genes from the
same subsystem. The function of genes having the same functional roles have been described in
Thermococcus kodakarensis (15205420). This is a homologous protein which implements the same function.
Compare Regions
The chromosomal region of the focus gene (top) is compared with four similar organisms. The graphic is centered on the focus gene, which is red and numbered 1. Sets of genes with similar sequence are grouped with the same number and color. Genes whose relative position is conserved in at least four other species are functionally coupled and share gray background boxes. The size of the region and the number of genomes may be reset. Click on any arrow in the display to refocus the comparison on that gene. The focus gene always points to the right, even if it is located on the minus strand.
